SNAP: workbench management tool for evolutionary population genetic analysis
نویسندگان
چکیده
منابع مشابه
SNAP: workbench management tool for evolutionary population genetic analysis
UNLABELLED The reconstruction of population processes from DNA sequence variation requires the coordinated implementation of several coalescent-based methods, each bound by specific assumptions and limitations. In practice, the application of these coalescent-based methods for parameter estimation is difficult because they make strict assumptions that must be verified a priori and their paramet...
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SUMMARY Previously we developed the stand-alone SNAP Workbench toolkit that integrated a wide array of bioinformatics tools for phylogenetic and population genetic analyses. We have now developed a web-based portal front-end, using the Mobyle portal framework, which executes all of the programs available in the stand-alone SNAP Workbench toolkit on a high-performance Linux cluster. Additionally...
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We have added two software tools to our Suite of Nucleotide Analysis Programs (SNAP) for working with DNA sequences sampled from populations. SNAP Map collapses DNA sequence data into unique haplotypes, extracts variable sites and manipulates output into multiple formats for input into existing software packages for evolutionary analyses. Map collapses DNA sequence data into unique haplotypes, ...
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vernetziko is an assistive software tool primarily designed for managing cross-references in XML-based electronic dictionaries. In its current form it has been developed as an integral part of the lexicographic editing environment for the German monolingual dictionary elexiko developed and compiled at the Institut für Deutsche Sprache, Mannheim. This paper first briefly outlines how vernetziko ...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2004
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/bti003